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Publications

  1. JA Morin, F Cerrón, J Jarillo, E Beltrán-Heredia, GL Ciesielski, JR Arias-Gonzalez, LS Kaguni, FJ Cao, B Ibarra (2017). DNA synthesis determines the binding mode of the human mitochondrial single-stranded DNA-binding protein, Nucleic Acids Research, 45(12): 7237-48

  2. T. Naranjo, F Cerrón, B Nieto-Ortega, A Latorre, A Somoza, B Ibarra*, E.M. Pérez* (2017).*corresponding authors. Mechanical measurement of hydrogen bonded host-guest systems under non-equilibrium, near-physiological conditions, Chemical Science, 8: 6037-6041

  3. J. Jarillo, E. Beltrán, J. Morín, JP García-Villaluenga, B Ibarra, F. Cao (2017), Mechanics, Thermodynamics, and kinetics of ligand binding to biopolymers. PLoS ONE, 12(4): e0174830

  4. Morin JA, Ibarra B, Cao FJ. (2016). Kinetic modeling of molecular motors: pause model and parameter determination from single molecule experiments, Journal of Statistical Mechanics: Theory and Experiments doi:10.1088/1742-5468/2016/05/054031.

  5. Morin JA, Cao FJ, Lázaro JM, Arias-Gonzalez JR, Valpuesta JM, Carrascosa JL, Salas M, Ibarra B. (2015). Mechano-chemical kinetics of DNA replication: identification of the translocation step of a replicative DNA polymerase. Nucleic Acids Research, 43(7):3643-52.

  6. Morin JA, Cao FJ, Valpuesta JM, Carrascosa JL, Salas M, Ibarra B. (2012). Manipulation of single polymerase-DNA complexes: a mechanical view of DNA unwinding during replication. Cell Cycle, 11 (16): 2967-68.

  7. Morin JA, Cao FJ, Lázaro JM, Arias-Gonzalez JR, Valpuesta JM, Carrascosa JL, Salas M, Ibarra B. (2012). Active DNA unwinding dynamics during processive DNA replication. Proc Natl Acad Sci U S A. 109(21):8115-20.

  8. Hormeño S, Ibarra B, Valpuesta JM, Carrascosa JL, Arias-Gonzalez JR (2012). Mechanical stability of low-humidity single DNA molecules. Biopolymers, 97 (4), 199 – 208.5.

  9. Hormeño S, Moreno-Herrero F, Ibarra B, Carrascosa JL, Valpuesta JM, Arias-Gonzalez JR (2011). Condensation prevails over B-A transition in the structure of DNA at low humidity. Biophysical Journal, 100 (8), 2006 - 2015.

  10. Hormeño S, Ibarra B, Carrascosa JL, Valpuesta JM, Moreno-Herrero F, Arias-Gonzalez JR (2011). Mechanical properties of high-G.C content DNA with a-type base-stacking. Biophysical Journal, 100 (8), 1996-2005.

  11. Ibarra B, Chemla YR, Plyasunov S, Smith SB, Lázaro JM, Salas M, Bustamante C. (2009). Proofreading dynamics of a processive DNA polymerase. EMBO J. 28(18):2794-802

  12. Hormeño S, Ibarra B, Chichon FJ, Habermann K, Lange B, Valpuesta JM, Carrascosa, Arias-Gonzalez JR (2009). Single centrosome manipulation reveals its electric charge and associated dynamic structure. Biophysical Journal, 97, 1022 – 1030.